Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKKNKVFLGVLLVLVVILGGGVLFYQSQFQKTTNQALAIAYKDAKVAKKDVIHQKIDKEFENFRGSYEIEFNTKSAEYSYHVDAKTGQILERDMDNNGFSKSTSQSSSSSSQKSHKISQEEAKKIAFKDANIEESEVSNLK-IKEEIE-----N----GKSVYDIDFVDLKNK--N--EVDYQIDAETGKIIERSRDHMND |
2O3O Chain:A ((145-252)) | ------------------------------------------------------------------------------VVLHLNG-KNEVVSYDQTTLETFK--------QIQKESLITEMDAVELLYYQNQLKEY--STVKSCKFGYVAQYPLTSTQVLAPVWRITVEYEK--EKKTVQEYFTVNALESTILDT------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O3O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3834 for 448 contacts (8.6/contact) +
2D Compatibility (PS) -9266 + (NN) 1393 + (LL) 7204
1D Compatibility (HY) -6000 + (ID) 800
Total energy: -3635.0 ( -8.11 by residue)
QMean score : 0.474
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