Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKKNKIKKTLVDQILDKAKIEHDS-LQLDALQ----GDLPNGIQKQDIFKTLALIGDKTGPIIGILPLTEHLSEKKLAKISGNKKVQMIPQKDLQKITGYIHGANNPIGIRQKHNYPIFIDTIALEKQELIVSAGEIGRSIRINSEVLADFVNAKFADIKE |
| 1WDV Chain:A ((3-152)) | ---------EKVEEWIKARGLTWRLLIMQKPTRTVAEAAALLGVSESEIVKTLIVLDNAGGVYAVVIPGDKRLNINSMKELAG-KPVRLARANEVVELTGYPVGGVPPVAL--PPNIVLVVDRILLSRKKVYGGGGRENALLEFSPRELVEATGAVVADVSE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WDV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7745 for 1105 contacts (7.0/contact) +
2D Compatibility (PS) -14447 + (NN) 3747 + (LL) 764
1D Compatibility (HY) 4800 + (ID) 450
Total energy: 2159.0 ( 1.95 by residue)
QMean score : 0.153
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