Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MNKIANTEVEINIFNLL-------------KKLWKK---------------------KFLITFVAIAFATAGLFYSLFIVTPQYTSSTRIYVINPNT----PNNSITAQDLQAGSFLA-----NDYKEIITSTDVL----------------EKVISSEKLNYPSSQLLQKITVSILKDTRVISISVEDANPKMSQKLANSVREAAVSKI--------KAVTQVEDITTLEKGNLPKAPSSPNIK--KNVLIGFIVGAGLSTIVLVIMGILDDRVNTEED--IEKVLGLTSLGIVSDLNKL |
| 3WO4 Chain:B ((1-301)) | GPESCTSRPHITVVEGEPFYLKHCSCSLAHEIETTTKSWYKSSGSQEHVELNPRSSSRIALHDCVLEFWPVELNDTG---SYFFQMKNYTQKWKLNVIRRNKHSCFTERQVTSKIVEVKKFFQITCENSYYQTLVNSTSLYKNCKKLLLENNKNPTIKKNAEFEDQGYYSCVHFLHHNGKLFNITKTFNITIVEDRSNIVPVLLGPKLNHVAVELGKNVRLNCSALLNEEDVIYWMFG--EENGSDPNIHEEKEMRIMTPEGKWHASKVLRIENIGESNLNVLYNCTVASTGGTDTKSFILVRKAD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WO4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11266 for 1337 contacts (-8.4/contact) +
2D Compatibility (PS) -23275 + (NN) 5086 + (LL) 496
1D Compatibility (HY) -7200 + (ID) 2300
Total energy: -38459.0 ( -28.77 by residue)
QMean score : 0.098
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