Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEKFGIGKAHSKIILMGEHSVVYGYPAIAIPLKNIEVTCLIEEAPQL-I--A--L-DMT--D----------P---------LSTA-----------IFAALDYLG--KTSSKIAYHIESQVPERRGMGSSAAVAIAAIRAVFDYFDE---------------DLEADLLECLVNRAEMIAHSNPSGLDAKTCLSENTIKFIRNIGFSTVPMHLNAYLVIADTGIHGHTKEAVDKVKSSGEA----VLPFLKELGYLAEASEDAI-------HKSDSKQLGSLMTKAHQSLKQLGVSSLEADHLVEVAISCGALGAKMSGGGLGGCIIALVKEKREA---ERLSQQLEREGAVNTWTEKV |
| 1KVK Chain:A ((1-367)) | MLSEVLLVSAPGKVILHGEHAVVHGKVALAVALNLRT-FLVLRPQSNGKVSLNLPNVGIKQVWDVATLQLLDT-EKLKKVAGLPRDCVGNEGLSLLAFLYLYLAICRKQRTLPSLDIMVWSELPPGAGLGSSAAYSVCVAAALLTACEEVTNPLKDRGSIGSWPEEDLKSINKWAYEGERVIHGNPSGVDNSVSTWGGALRYQQGK-MSSLKRLPALQILLTNTKVPRSTKALVAGVRSRLIKFPEIMAPLLTSIDAISLECERVLGEMAAAPVPEQYLVLEELMDMNQHHLNALGVGHASLDQLCQVTAAHG-LHSKLTGAGGGGCGITLLKPGLERAKVEAAKQALTGCGFDCWETSIG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145812 for 2267 contacts (-64.3/contact) +
2D Compatibility (PS) -30707 + (NN) -9218 + (LL) 24
1D Compatibility (HY) -14800 + (ID) 3450
Total energy: -203963.0 ( -89.97 by residue)
QMean score : 0.446
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