Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQYSEIMIRYGELSTKKKNRMRFINKLKNNMEHVLSIYPDVSVKTDRDRGHVYLNGTDYHEVAESLKEIFGIQAFSPSFKVEKNVDTLVKAVQEIMTSVYKDGMTFKITAKRSDHSFELDSRALNHTLGDAVFSVLPNIKAQMKQPDINLKVEIRDEAAYISYENIRGAGGLPVGTSGKGMLMLSGGIDSPVAGYLALKR-GVDIEAVHFASPPYTSPGALKKAHDLTRKLTKFGGNIQ-FIEVPFTEIQEE-IK-----EK----APEAYLMTLTRRFMMRITDRIRENRNGLVIINGESLGQVASQTLESMQAINAVTATPIIRPVVTMD---KLEIIDIAQKIDTFDISIQPFEDCCTIFAPDRPKTNPKIKNTEQYEKRMDVEGLVERAVAGIMVTTIQPQADSDDVDDLIDDLL |
| 1KOR Chain:A ((1-165)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKIVLAYSGGLDTSIILKWLKETYRAEVIAFTADIGQ---GEEVEEAREKALRT---G--ASKAIALDLKEEFVRDFVFPMMRAGAVYEGYYLLGTSIARPLIAKHLVRIAEEEGAEAIAHGATGKG-NDQVRFELTAYALKPDIKVIAPWREWSFQGRKEMIAYAEAHGIPVPPYSMDANLLHISYEGGVLEDPWAEPPKGMFRMTQDPEEAPDAPEYVEVEFFEGDPVAVNGERLSPAAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KOR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63686 for 1145 contacts (-55.6/contact) +
2D Compatibility (PS) -16722 + (NN) -9351 + (LL) 12324
1D Compatibility (HY) -1200 + (ID) 1200
Total energy: -79835.0 ( -69.72 by residue)
QMean score : 0.449
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