Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKIKDFASRAINTRLGFILLLVVIYWLKTIWAYHTDFYLGLENSYQLFLTIINPIPLGLLIIGLALYVKRTKAFYITAFITYAIVNILLIANAIYYREFSDFITVSAVLASSKTSAGLGDSALNLLRIWDLVYVFDFIILIFLFATKKIHLDDRPFNKRASFSITALSGLLFSINLFLAEIDRPELLSRGFSNTYIVKALGLPSFSIYSGNQTYQAQKERNGATAQELATAKKYVAEHYAKPNPEYYGIGKGRNVIMIHLESFQQFLIDYKLNVDGKEHVVTPFINSLYHSKET--ISFSNFFHQVKAGKTSDAETLMENSLFGLSSGSFMVNYGGENTQFAAPHILAQNGGYSSAVFHGNVGTFWNRNNAYKQWGYDYFFDSSYFSKQTKDNSFQYGLNDKYMFADSIKYLEHMQQPFYTKFITVSNHYPYTSLKGESDEEGFPLAKTNDETINGYFATANYLDTALKSFFEYLKAAGVYDNSIIVMYGDHYGISNTRNPSLAELLGKDPETWSEYDNAMLQRVPYMIHIPGYSKGFISNTYGGEVDNLPTLLHILGIDTSKYTQLGQDLLSKDNKQMVAMRTTGQYITPKYTNYSGHLYYTDSGQEITNPDETTKAEIKAIRDATNKQLSTSDSIQTGDLLRFDENNGLKTVEVEKFNYTHSLKALKAKERKLKDRSTSIYSKHNNKSTVDLFHAPSYLELQDPNKTHKTSKK |
2W8D Chain:A ((3-422)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DSSDVTEVENYMKANYDVPNNVYFGKAEGKNVIYVSLESLQSFIIDYKI--DGKE--VTPFLNKLAH--DNETFYFDNFFHQTGQGKTSDAEFMMENSLYPLAQGSVFVNK-AQNTLQSVPAILKS-KNYTSATFHGNTQTFWNRNEMYKAEGIDKFFDSAYYD-MNEENTKNYGMKDKPFFKESMPLLESLPQPFYTKFITLSNHFPFGMDEGD---TDFPAGDFGDSVVDNYFQSAHYLDQSIEQFFNDLKKDGLYDKSIIVMYGDHYGISENHNKAMAKVLGKDEIT--DYDNAQLQRVPLFIHAAGVK-GEKVHKYAGDVDVAPTILHLLGVDTKDYLMSGSDILSKEHREVIPFR-NGDFISPKYTKISGKYYDTKTGKELDE-----SEVDKSEDSLVKKELEMSDKIINGDLLRFYEPKGFKKVNPSDYDYTKH--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149981 for 3669 contacts (-40.9/contact) +
2D Compatibility (PS) -45380 + (NN) -18018 + (LL) 22536
1D Compatibility (HY) -37600 + (ID) 10050
Total energy: -238493.0 ( -65.00 by residue)
QMean score : 0.517
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