Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITIDKILEILKNDHNFREILFHEHYYYNWTQNVTFNALSYDSRQISSDTLFFAKGATFKKEYLDSAITAGLSFYVSEIDYGADIPVILVNDIKKAMSLISMSFYNNPQNKLKLLAFTGTKGKTTAAYFAYHMLKV-NHRPAMLSTMNTTLDGKSFFKSHLTTPESLDLFRMMATAVENQMTHLVMEVSSQAYLTKRVYGLTFDVGVFLNISPDHIGPIEHPTFEDYFFHKRLLME---NSNAVVVNSQMDHFNIVKEQVEYIPHDFYGDYSE-NVI-----TES-QA-FSFHVKGKLENTYDIKLIGKFNQENAIAAGLACLRLGVSIEDIKNGIA-QTTVPGRMEVLTQ----TNGAKIFVDYAHNGDSLKKLLAVVEEH-QKGDIILVLGAPGNKG-QSRRKDFGDVINQHPNLQVILTADDPNFE------DPLVISQEIASHINRPVTIIIDREEAIANASTLTNCKLDAIIIAGKGADAYQIIKGNRDNYSGDLEVAKKYLKR |
| 1P3D Chain:A ((118-464)) | ---------------------------------------------------------------------------------------------------------------RHGIAVAGTHGKTTTTAMISMIYTQAKLDPTFVN--GGL-----------VKSAGKN--AH-----LGASRYLIAEADESDA---SFLHLQPMVSVVTNMEPDHMDT-YEGDFEKMKATYVKFLHNLPFYGLAVMCADDPVLMELVPKVG-RQVITYGFSEQADYRIEDYEQTGFQGHYTVICPNNERINVLLNVPGKHNALNATAALAVAKEEGIANEAILEALADFQGAGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVGVTIKAAREGWGDKRIVMIFQPHRYSRTRDLFDDFVQVLSQ--VDALIMLDVYAAGEAPIVGADSKSLCRSIRNLGKVDPILVSDTSQLGDVLDQIIQ-DGDLILAQGAGSVSKISRGLAESW-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P3D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145664 for 2768 contacts (-52.6/contact) +
2D Compatibility (PS) -34084 + (NN) -9861 + (LL) 10628
1D Compatibility (HY) -5200 + (ID) 2750
Total energy: -186931.0 ( -67.53 by residue)
QMean score : 0.439
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