Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------MAEIDYKKVTGMIHST----ESFGSVDGPGIRFIIF------------MQGCKMRCQYCHNPDTWEMETNNSKERTVEDVLKEALRYKHFWGKDG-----GITVSG-GEAML-QIDFITALFIEAKKLGIHTTLDTCGFAYRATPEYHAILEKLLDVTDLVLLDLKEIDPEQHKIVTRQSNKNILQF----ARYLSD---RGTPVWIRHVLVPGLTDIDDHLKRLGEFVQTLDNVDKFEVLPYHTMGEFKWRELGIPYPLAGVKPPTPERVKNAKDIMKTESYTEYLKRIQN- |
| 3RFA Chain:A ((17-349)) | KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQG--FNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPN-DEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK--DTPCKINLIPWN------------PFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62245 for 1834 contacts (-33.9/contact) +
2D Compatibility (PS) -25941 + (NN) -5850 + (LL) 1700
1D Compatibility (HY) -13600 + (ID) 2400
Total energy: -108336.0 ( -59.07 by residue)
QMean score : 0.317
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