Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRVHITSIYGQSPRSIALISQKLVKDVGRQLGYDEMGIYFYNDHAETHGERSTRMDGIIAGLGRGDIVVFQVPTWNSTEFDELFLDKLQAY-GARIITFVHDIVPLMFESN------------FY--L--LDRVIDMYNRSDVVILPTKAMH------DYLIEK-G-MTTSKVLYQEVWDHPVNIDLP-------------------RPECQKVLSFAGDIQRFPFV----NDWK------E--NIPLIYYGDGS----------R-----L---------NSEANVHAQGWKDDVELMLSL----SKRGGFGLCWSEDREELVERRYSRMNASYKLSTFLAAGLPIIANHDISSRDFIKQHGLGFTVET--LEEAVEKINNME--KETYDSYVENVEKIATLLRNGYITKKLLIDAVHMLYR |
| 2R60 Chain:A ((120-457)) | ---------------------------------------------------------------FPQVVTTHYGDG---GLAGVL---LKNIKGLPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLAS-KGSVFALT-----------SFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFESEETWSAYQEKGKQRV----EERYTWQETARGYLEVIQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R60.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168833 for 1792 contacts (-94.2/contact) +
2D Compatibility (PS) -27755 + (NN) -17794 + (LL) 5468
1D Compatibility (HY) 1600 + (ID) 1550
Total energy: -208864.0 ( -116.55 by residue)
QMean score : 0.372
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