Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MVLQDFDNLLKKYAQLIISKGLNVQKGHTLALTIDVEQVHLARLLTEAAYEKGASEVIVDYTDDFITRQRLLHASDEVLTNVPQYTVDKS-----LALLNKKASRLVVKSSNPNAFATVDPKRLSETTRATAIAL------EEQSRAIQANKVSWNVAAAAGREWAALVFPELKTSDQQVDALWDTIFKLNRI--------YEDDPIAAW------DAHEAKLLEKATRLNQEQFDALHYTAPGTDLTLGMPKNHIWEAAGSLNAQGETFIANMPTEEIFSAPDYRRADGYVTSTKPLSYAGV-IIENMTFTFKDGKIINVTAEKGQETVQRLIEENDGARSLGEVALVPHKTPISLSGLIFFNTLFDENASNHLAIGSAYAFNVEGGTEMTSQELDEAGLNRSSTHVDFMIGSEQMDIDGIRADGTAVPIFRN--GEWAI |
| 4R33 Chain:A ((35-418)) | GDFVLPELEDVRAEAATVDTRAVLALAEGEEPA-----ESRAAVALALWEDRSIGTAELQAAAEARCGARRPRLHTF------VPLYTTNYCDSECKMCSMRKGNHRLDRKFSG-RKEITEQLEILYHHEGVRGVGFLTGEYEDKHTRLASAFRIGWAIRTALDLGFERVYFNIGSMEQDEIDVLGEWIGREDPVTMCVFQESYDRETYRRFMGKTSVGVPKADFDRRVVSFDRWLDAGYRYVNPG--VLVGLHDD-LSAELVSLVAHGDHLRSRGATAD-LSVPRMRPAMKSRDTTRVGDDDYLRLMSVVAFTCPEQRLVLTTREP--QEFQDVALGLAGVISPGSPDVAPYRA------------------------------GCEARNDEKSSQFLVADLRR-----------PRHILGRIEASGTPVDHFVNPAGEASR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R33.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 15362 for 2862 contacts (5.4/contact) +
2D Compatibility (PS) -36640 + (NN) 2512 + (LL) 3248
1D Compatibility (HY) -8000 + (ID) 3550
Total energy: -27068.0 ( -9.46 by residue)
QMean score : 0.166
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