Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKISEEEVRHVANLSKLRFSDQETKEFASSLSKIVDMIELLNEVDTEGVPVTTTMADRKTVMREDIAQPGNNRDDLFKNVPQHQDYYIKVPAILEDGGDA
3H0L Chain:C ((2-92))
--VDREWVLKIAKLARLELKEEEIEVFQKQLSDILDFIDQLKELDTENVE-PYIQEFEETPMREDEPHPSLDREKALMNAPERKDGFFVVPRVV------
General information:
TITO was launched using:
RESULT:
Template:
3H0L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8042 for 369 contacts (-21.8/contact) +
2D Compatibility (PS) -9689 + (NN) -5059 + (LL) 216
1D Compatibility (HY) -6000 + (ID) 1500
Total energy: -30074.0 ( -81.50 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_3H0L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H0L-query.scw
PDB file :
Tito_Scwrl_3H0L.pdb
: