Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MISSYHRPTRALIDLEAIANNVKSVQEHIPSDK--KTFAVVKANAYGHGAVEVSKYIESI-VDGFCVSNLDEAIELRQAGIVK-MILVLGVVMPEQVILAK-NENITLTVASLEWLRLCQTSAVDLSG---LEVHIKVDSGMGRIGVRQLDEGNKLISELGES---GASVKGIFTHFATADEADNCKFNQQLTFFKDFISGLDNC-PDLVHASNSATSLWHSETIFNAVRLGVVMYGLNP-SGTDLDLPYPINPALSLESELVHVKQLHDGSQVGYGATYQVTGDEFVGTVPIGYADGWTRDMQGFSVIVNGELCEIIGRVSMDQMTIRLPQKYTIGTKVTLIGQQGSCNITTTDVAQKRQTINYEVLCLLSDRIPRYY |
| 1BD0 Chain:A ((12-244)) | ------------VDLDAIYDNVENLRRLLPD--DTHIMAVVKANAYGHGDVQVARTALEAGASRLAVAFLDEALALREKGIE-APILVLGASRPADAALAAQ-QRIALTVFRSDWLEEASALY---SGPFPIHFHLKMDTGMGRLGVKDEEETKRIVALIE--RHPHFVLEGLYTHFATADEVNTDYFSYQYTRFLHMLEWLPS-RPPLVHCANSAASLRFPDRTFNMVRFGIAMYGLAPSPGIKPLLPYPLKEAFSLHSRLVHVKKLQPGEKVSYGATYTAQTEEWIGTIPIGYADGWLRRLQHFHVLVDGQKAPIVGRICMDQCMIRLPGPLPVGTKVTLIGRQGDEVISIDDVARHLETINYEVPCTISYRVPRIF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BD0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157944 for 1834 contacts (-86.1/contact) +
2D Compatibility (PS) -23985 + (NN) -7870 + (LL) 1320
1D Compatibility (HY) -15600 + (ID) 4700
Total energy: -208779.0 ( -113.84 by residue)
QMean score : 0.569
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