Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIENYCQDYCLETIFPKHYFKDLQVITLTAGQSVCKQGEQLEYLHYIVKGRFKIVRRLFNGKEHILDIKTKPTLIGDIELLTNRQIVSSVIALEDLTVIQLSLKGRKEKLLTDATFLLKLSQELAQAFHDQNIKASTNLGYTVKELLASHILAIEEQ--------G--YFQLELSSLADSFGVSYRHLLRVIHDMVKEGLIQKEKPKYFIKNRFALESLNIQP
3E6C Chain:C ((17-228))
--------DNFFPIEKLRNYTQMGLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTG---NNIYATAMEPTRTCWFSEKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVAEMNTYNPTIRILRLFYELCSSQGKRVGDTYEITMPLSQKSIGEITGVHHVTVSRVLASLKRENILDKKKNKIIVYNLGELKHLSEQT
General information:
TITO was launched using:
RESULT:
Template:
3E6C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86538 for 1429 contacts (-60.6/contact) +
2D Compatibility (PS) -22410 + (NN) -10237 + (LL) 768
1D Compatibility (HY) -8000 + (ID) 1800
Total energy: -128217.0 ( -89.72 by residue)
QMean score : 0.370
(partial model without unconserved sides chains):
PDB file :
Tito_3E6C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E6C-query.scw
PDB file :
Tito_Scwrl_3E6C.pdb
: