Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKKSLISNLILINSITLFLGFYLIYFSVNYVIKDYVHQMTRNSMQANFTILDSIYNNKKIPDENMVNQDSIFVWSYYAIFDQHYRMKYGTDNHKKESHDIIRYLTQKRLWQISKEKDGMFVTIKKKTYYVMTKDYSGILVDGSIKKVPKAQSQLFHVINFSDITYTQHLITKINHFLIVILVLTYIPMLFIMRKTFTGIRESIQSVQTYISSLWKNQGNHQSSQKEIVFSDFDPLLLESQEMANRIYQAEESQRNFFQNASHELRTPLMSIQGYTEGVQEGIIDAELAHSVILQESKKMKQLVDDIILLSKLDSNLSDQKDEFSLNELLNSIIAYFKPLANKQKISITYRPDKHEKLLKGNEELIQRAINNILSNALRYAVSH--IEISY----TNQKLTISNDGPAISKEDLPYIFDRFYKGHGGQTGIGLAMTKEIIK-QHHGNIIAESDSTSTTFTIYFNCHKIA |
| 3A0Y Chain:A ((607-752)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TEFNLNELIREVYVLFEEKIRKMNIDFCFETDNEDLRVEADRTRIKQVLINLVQNAIEATGENGKIKITSEDMYTKVRVSVWNSGPPIPEELKEKIFSPFFTTK--GTGLGLSICRKIIEDEHGGKIWTENRENGVVFIFEIPKTP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A0Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81255 for 1015 contacts (-80.1/contact) +
2D Compatibility (PS) -14624 + (NN) -5058 + (LL) 25764
1D Compatibility (HY) -10400 + (ID) 1800
Total energy: -87373.0 ( -86.08 by residue)
QMean score : 0.519
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