Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFYTIEELVEQANSQHKGNIAELMIQTEIEMTGRSREEIRYIMSRNLEVMK--ASVIDGLT-PSKSISGLTGGDAVKMDQYLQSGKTISDTTILAAV--------------RNAMAVNEL--NAKMGLVCATPTAGSAGCLPAVISTAIEKLNLTEEEQLDFLFTAGAFGLVIGNNASISGAEGGCQAEVGSASAMAAAALVMAAGGTPFQASQAIAFVIKNMLGLICDPVAGLVEVPCVKRNALGSSFALVAADMALAG--------IESQIPVDEVIDAMYQVGSSLPTAFRETAEGGLAATPTGRRYSKEIFGE-- |
4PHR Chain:A ((1-277)) | ------------------SEFELMKRLSEIKVLPILESLKYIKHNHASVVRFGDGEIDLMTGHSIPYQDYNEKLAKRLQQILQTK---SDEKLLVCLPDVFSNMDRYNQNARHFWERHFLKYSEFYLNCCDAPFYGSTFISRPYIDLIDKSPSEAYFESLKELWRGKDLLIVEGAT---------------SRSGVGNDLFVAASSIKRLVCPSKNAFQYYDEILRLTEKNAKNRLILVM----LGPTAKVLVADLTTKGYQAIDLGHIDSEYEWYEMGATYKVKLTNKHTAEFNYDEG--IELEFSQEYQEQIVARIG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84782 for 1880 contacts (-45.1/contact) +
2D Compatibility (PS) -25220 + (NN) 1935 + (LL) 2600
1D Compatibility (HY) -8800 + (ID) 2550
Total energy: -116817.0 ( -62.14 by residue)
QMean score : 0.078
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