Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIVEGVSLHLIKNQQFKTNHLTFRFSGDFNN---KTVARRSLVAQMLVTANAKYPKVQEFREKLASLYGASLSTKISTKGLVHIVDIDIVFVKNTFTLEQENIVEQIITFLEDMLFSPLISLEQYQTSIFDTEKKNLIQYLEADIEDNFYSSDLALKSLFYNNKTLRLPKYGTASLVES------E-NSFTAYQEFQKMLKEDQLDIFVVGDFDDYRMIQAF-NRMAFEPRHKVLAFDYT-QTYEN--ITRSQVEDKDVNQSIMQLAYHLPITYKDEDYFALIVFNGLFGAFAHSLLFTEIREKQGLAYTIGSQFDS---FTGLFTIYAGIDKE---NRERFLKLINKQFNNIKMGRFSSTLLKQTKDILKMNYVL-ASDNPKVIVDHIYHEHYLDQFHTSALFIDKVDDVTKSDIVSVATKLKLQAFYFLEGN |
| 3CWW Chain:A ((38-447)) | LELANGIKVLLISDPTTDKSSAALDVHIGSLSDPPNIAGLSHFLQHMLFLGTKKYPKENEYSQFLSEH-AGSSNAFTSGE----HTNYYFDVSHE--------HLEGALDRFAQFFLSP-----LFDESAKDREVNAVDSEHEKNVMNDAWRLFQLEKATGNPKHPFSKFGTGNKYTLETRPNQEGIDVRQELLKFHSAYYSSNLMAVVVLGRESLDDLTNLVVKLFSEVENKNVPLPEFPEHPFQEEHLKQLYKIVPIKDIRNLYVTFPIPDLQKYYKSNPGHYLGHLIGHEGPGSLLSELKSK-GWVNTLVGGQKAGARGFMFFIINVDLTEEGLLHVEDIILHMFQYIQKLRAEGPQEWVFQELKDLNAVAFRFKDKERPRGYTSKIAGILHYYPLEEVLTAEYLLEEFRPDLIEMVLDKLRPENVRVAIVS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CWW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201028 for 3065 contacts (-65.6/contact) +
2D Compatibility (PS) -40643 + (NN) -8605 + (LL) 1744
1D Compatibility (HY) -6800 + (ID) 2350
Total energy: -257682.0 ( -84.07 by residue)
QMean score : 0.418
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