Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPYIILEDQTRLYYETHGSGTPILFIHGVLMSGQFFHKQFSVLSANYQCIRLDLRGHGESDKVLHGHTISQYARDIREFLNAMELDHVVLAGWSMGAFVVWDYLNQFGNDNIQAAVIIDQSASDYQWEGWEHGPFDFDGLKTAMHAIQTDPLPFYESFIQNMFAEPPAETETEWMLAEILKQPAAISSTILFNQTAADYR-GTLQNINVPALLCFGEDKKFFSTAAGEHLRSNIPNATLVTFPKSSHCPFLEEPDAFNSTLLSFLDGVIGKS
3BF8 Chain:A ((1-255))----MKLNIRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVNDHNIIQVDVRNHGLSPRE-PVMNYPAMAQDLVDTLDAQQIDKATFIGHSMGGKAVMALTALA-PDRIDKLVAIDIAPVDYH-------VRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLNDH----


General information:
TITO was launched using:
RESULT:

Template: 3BF8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1418 -196854 -138.83 -775.02
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -138.83
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.531

(partial model without unconserved sides chains):
PDB file : Tito_3BF8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3BF8-query.scw
PDB file : Tito_Scwrl_3BF8.pdb: