Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKEEIIERFTTYVKVDTQSDESVDTCPSTPGQLTLGNMLVDELKSIGMQDAAID--ENGYVMATLPSNTEKDVPTIGFLAHVDTATDFTGKNVNPQIIESYDGKDIVLNEQLQVTLSPDQFPELSGYKGHTLITTDGTTLLGADNKAGIAEIMTAM----DYLIKHPE-IKHGTIRVAFTPDEEIGR--GPHKFDVKRFNASFAYTVDGGPLGELEYESFNAAAAKITIKGNNVHPGTAKGKMINSAKIAMKLNSLLPADEAPEYTEGYEGFYHLLSIQGD------VEETKLHYIIRDFDKENFQNRKETMKRAVEELQNEYGQDRILLDMNDQYYNMREKIEPVIEIVNIAKQAMENLGIEPKISPIRGGTDGSQLSYMGLPTPNIFTGGE-NFHGKFEYISVDNMVKAVNVIVEIAKQFEAQA
2RB7 Chain:A ((5-360))-MQHIVELTSDLIRFPSMHSRP-------EQISRCAGFIMDWCAQNGIHAERMDHDGIPSVMVL-PEK---GRAGLLLMAHIDVVDAED---------DLFVP-RVE----------------------NDRLYGRG----ANDDKYAVALGLVMFRDRLNALKAAGRSQKDMALGLLITGDEEIGGMNGAAKALP-LIRADYVVALDGGNPQQVITKEKGIIDIKLTCTGKAAHGARP-WMGVNAVDLLMEDYTRLKTLFAEENEDHWHRTVNLGRIRAGESTNKVPDVAEGWFNIRVTEHDDPGALIDKIRKTVSGT--------VSIVR---TVPVFL--AADSPYTERLLALSGA-----TAGKAHGASDARYLGENGLTGVVWGAEGFNTLHSRDECLHIPSLQSIYDPLMQLAREMEE--


General information:
TITO was launched using:
RESULT:

Template: 2RB7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1906 31859 16.71 93.70
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 16.71
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.399

(partial model without unconserved sides chains):
PDB file : Tito_2RB7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2RB7-query.scw
PDB file : Tito_Scwrl_2RB7.pdb: