Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MS-TAAVLRARFPR-AVANLRQYGGAAARGLDEA-GQLTWFALTSIGQIAHALRYYRKETLRLIAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTG-FFAALINVRIAGPVVT-GVALAATVGAGATAELGAM-RISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYALAMIMSFLSPQITTTVLYGQSNGT----YE-HYFQTFLRPD-DVFWSFLEALIITAIVMVSHC----------YYGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALAL-----YGVDPNFNLTV--- |
| 1IXK Chain:A ((3-315)) | LSPSMLDKLLRLGYSKLFADRYFQLWGERAIRIAEAMEKPLPRCFRV-----NTLKISVQDLVKRLNKKGFQFKRVPW----AKEGFCLTREPFSITSTPEFLT-GLIYIQEASSMYPPVALDPKPGEIVADMAAAPG-----GKTSYLAQLMRNDGVIYAFDV-DENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDAPCTGSGTIHRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFDVELLPLKYGEPALTNPFGIELSEEIKNARRLYPDVHETSGFFIAKIRKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IXK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132124 for 2044 contacts (-64.6/contact) +
2D Compatibility (PS) -27096 + (NN) 8550 + (LL) 1144
1D Compatibility (HY) 8400 + (ID) 1000
Total energy: -142126.0 ( -69.53 by residue)
QMean score : 0.068
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