Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------MKITGTVVKLGIVSVVLLFFTVM--IIVIFGQMRFDRTNGYTAEFSNVSGLRQGQFVRASGVEIGK-------VKALHLV-DGGRRVRV----E-FNIDRSVPLYQSTTAQIRYSDLIGNR----------YVELKRGEGKGANDLLPPGGLIPLSRTSPALDLDALI--GGFKPVFRALDPAKVNNIANALIT-VFQ-GQGG--------------TINDILDQ--TAQLTSQIAERDQAIGEVVKN---LNIVLD-TTVKHRKEFDETVNNLENL--ITGLRNHSDQLAGGLA----HISNGAGTVADLLAENRTLVRKAVSYLDAIQQPVIDQRVELDDLLH---KTPTALTALGRANGTYGDFQNFY-LCDLQI-KW-NGFQA-----GGPVRTVKLFSQPTGRCTPQ |
| 4N9N Chain:A ((604-878)) | NLNLIDMKLFHHYCTKVWPTITAAKVSGPEIWRDYIPELAFDYPFLMHALLAFSATHLSRTETGLEQYVSSHRLDALRLLREAVLEISENNTDALVASALILIMDSLANASVDNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLD----AVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYVDSMSPSAWIFHVKGAATILTAVWPLSERSKFHNIISVDLSDLGDVINPDVGTITELVCFDESIADL---YPVGLDSPYLITLAYLDKLHREKNQGDFILRVFTFPALLDKTFLALLMTGDLGAMRIMRSYYKLLRGFATEVKDKVWFLEGVTQVLPQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N9N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21805 for 1195 contacts (-18.2/contact) +
2D Compatibility (PS) -18972 + (NN) 2222 + (LL) 384
1D Compatibility (HY) 6400 + (ID) 300
Total energy: -32071.0 ( -26.84 by residue)
QMean score : 0.098
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