Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MSQAQPRPAAPNPKRNVKAI--RTVRFWMAPIATTLALMSALAALYLGG--ILNPMTNLRHFPIALVNEDAGPA---GQQIVDGLVSGLDKNKFDIRVV------SPDEARRLLDTAAVYGSALIPPTFSSQLRDFGASAVTPTRTDRPAITISTNPRAGTLAASIAGQTLTRALTVVNGKVGERLTAEVAAQTGGVALAGAAAAGLASPIDVKSTAYNPLPNGTGNGLSAFYYALLLLLAGFTGSIVVSTLVDSMLGYVPAEFGPVYRFAEQVNISRFRTLLVKWAVMVVLALLTSGVYLAIAHGLGMPIPLGWQVWLYGVFAIIAVGVT-SSSLIAVLGSMGLLVSMLIFVILGLPS----AGATVPLEAVPAFFRWLAQFEPMHQVFLGVRSLLYLNGNADAGLSQALTMTSIGLIIGLLLGGFITHLYDRSSFHRIPGAVEMAIAVEHQAQYQARQSARESSSEQP-- |
| 2BG1 Chain:A ((8-491)) | ITYDYLYFTTLAEAQERMYDYLAQRDNVSAKELKNEATQKFYRDLAAKEIENGGYKITTTIDQKIHSAMQSAVADYGYLLDDGTGRVEVGNVLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILSNYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYWTYRMLRE-NGVDVKGYMEKMGYEIPEY----GIESLPMGGGIEVTVAQHTNGYQTLANNGVYHQKHVISKIEA------------ADGRVVYEYQDKPVQVYSKATATIMQGLLREVLSSRVTTTFKSNLTSLNPTLANADWIGKTGTTNQDENMWLMLSTPRLTLGGWIGHDDNHSLSQQAGYSNNSNYMAHLVNAIQQASPSIWGNERF-----ALDPSVVKSEVLKSTGQKPGKVSVEGKEVEVTGSTVTSYWANKSGAPATSYRFAIGGSDADYQNAWSSIVG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BG1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -252747 for 3696 contacts (-68.4/contact) +
2D Compatibility (PS) -45395 + (NN) -9134 + (LL) 1320
1D Compatibility (HY) 16000 + (ID) 2350
Total energy: -292306.0 ( -79.09 by residue)
QMean score : 0.149
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