Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQGPRERMVVSAALLIRERGAHATAISDVLQHSGAPRGSAYHYFPGGRTQLLCEAVDYAGEHVAAMINEAEG---G-L-ELLDALIDKYRQQLLSTDFRAGCPIAAVSVEAGDEQDRERMAPVIARAAAVFDRWSDLTAQRFIA----DGIP-PDRAHELAVLATSTLEGAILLARVRRDLTPLDLVHRQLRNLLLAELPERSR
4YZE Chain:A ((7-193))
-HDTREHLLATGEQLSLQRGFTGMGLSELLKTAEVPKGSFYHYFR-SKEAFGVAMLERHYAAYHQRLTELLQSGEGNYRDRILAYYQQTLNQFSQHGTISGCLTVKLSAEVSD-----LSEDMRSAMDKGARGVIALLSQALENGRENHSLTFSGEPLQQAQVLYALWLGANLQAKISRSFEPLENALAHVKNI----------
General information:
TITO was launched using:
RESULT:
Template:
4YZE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78701 for 1231 contacts (-63.9/contact) +
2D Compatibility (PS) -19476 + (NN) -11986 + (LL) 1300
1D Compatibility (HY) -4400 + (ID) 1700
Total energy: -114963.0 ( -93.39 by residue)
QMean score : 0.477
(partial model without unconserved sides chains):
PDB file :
Tito_4YZE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4YZE-query.scw
PDB file :
Tito_Scwrl_4YZE.pdb
: