Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTHGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDR-VVHLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNADFAQVL-----------GARFVAVDHGRTVVPVTATDIRADPL--GHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKWVPERAKMLRELNGGSLIGLEWAEIVRGQIASEEALARDADRVLICDTDPLATTVWAEFLAGGCPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAGRSFVVITGGWEERLSVSLRAVEELVRARR |
3ND5 Chain:A ((2-158)) | RKIALFPGSFDPMTNGHLNLIERSAKLFDEVIIGVFI----LFTPEEKKYLIEEATKEMPNVR-VIMQET---QL-------TVESAKSL---GANFLIRGIRNVKDYEYEKDIAKMNQHLAPEIETVFLLAEEPYAHVSSSLLKEVLRFGGDVSDYLPPNIYHALKQK------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ND5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87352 for 1020 contacts (-85.6/contact) +
2D Compatibility (PS) -14659 + (NN) -5642 + (LL) 13372
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: -97281.0 ( -95.37 by residue)
QMean score : 0.302
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