Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSTNNLTPSSLREAFGHFPTGVVAIAAEVDGVRQGLAASTFVPVSLEPPLVSFCVQNTSTTWPKLTGVPMLGISVLGEAHDAAVRTLAAKTGDRFAGLETVSNDAGAVFIKGTSVWLESAIEQLVPAGDHTIVVLRVNQVKVDP-NVAPIVFHRSVLRRLGV
4XHY Chain:A ((18-177))
-FHPA---ARLLREALGRFATGVTVVTTAGPQGPLGMTVNSFSSVSLEPPLVLWCPARTSARHAAFAEAGAWSVHVLGSEQLETCLRFTRG-GRQFEGLDTVLTPEGVPVIPGVAARFDCAAHAAHEAGDHSVLIGRVLRVTVAGPGDHPLVFAAGRFGQFE-
General information:
TITO was launched using:
RESULT:
Template:
4XHY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99477 for 1136 contacts (-87.6/contact) +
2D Compatibility (PS) -17288 + (NN) -5025 + (LL) 600
1D Compatibility (HY) -8000 + (ID) 2300
Total energy: -131490.0 ( -115.75 by residue)
QMean score : 0.519
(partial model without unconserved sides chains):
PDB file :
Tito_4XHY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4XHY-query.scw
PDB file :
Tito_Scwrl_4XHY.pdb
: