Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRENLGGVVV-RLGVFLAVCLLTAFLLIAVFGEVRFGDGKTYYAEFANVSNLRTGKLVRIAGVEVGKVTRISINPDATVRVQFTADNSVTLTRGTRAVIR-YDNLFGDRYLALEEGAGGLAVLRPGHTIPLARTQPALDLDALIGGFKPLFRALNPEQVNAL----SEQLLHAFAGQGPTIGSLLAQSAAVTNTLADRDRLIGQVITNL--------NVVLGSLGAHTDRLDQAVTSLSALIHRLAQRKTDISNAVAYTNAAAGSVADLLSQARAPLAKVVRET--DRVAGIAAADHDYLDNLLNTLPDKYQALVRQGMYGDFFAFYLCDVVLKVNGKGGQPVYIKLAGQDSGRCAPK |
| 4RKS Chain:A ((21-337)) | TYRSIGSTAYPTIGVVL-------------LGGIANPVTRTPLHTSAGIAYSDSCG---------SIRSETRIYADEATHIYFNGTESTDDNRSVRRVLDRYSSVFEEAF-------GTKTVSYSSQNFGILSGSSDAGAASIGAAILGLKPDLDPHDVENDLRAVSESAGRSLFG-GLTITWS-DGFHAYTEKILDPEAFSGYSIVAFAFDYQRNPSDVIHQNIVRSDLYPARKKHADEHAHMIKEYAKT-NDIKGIFDLAQEDTEEYHSILRGVGVNVIRENMQKLISYLKLIRKDYWNAYIVTGGSNVYVAVESENADRLFSIE--------NTFGSKKKMLRIVG-GAWHRRPE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RKS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101144 for 2527 contacts (-40.0/contact) +
2D Compatibility (PS) -31672 + (NN) -5312 + (LL) 5364
1D Compatibility (HY) -6000 + (ID) 2550
Total energy: -141314.0 ( -55.92 by residue)
QMean score : 0.226
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