Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGAVLDHLRIAMTAAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRLPFDSPMYWHLFEPALRDAVDK-------DVAMLDVVSD-DQRTRLVVASQLSEVLRRDDPYYHAELEWWTSPFVLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLSTPSDT--------------RADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTRQRGEPQALIRVGIAPPLAAVPAPTPRRPLDSVLQIRQTPEKGRNASDRNARETGWFSPP |
| 3GFA Chain:A ((2-197)) | ----------------------------------------------------------------------------------------------------------MISDSISKRRSIRK-YKNQSISHETIEKIIEAGINAPSSKNRQPWRFVVITEKEKESMLKAMSKGIQNEINDNG-L---LPGSRQ-------------HIAGAN----------------YTVEIMKQAPVTIFILNILGKSPLEKLSPEERFYEMANMQSIGAAIQNMSLTAVELGLGSLWICDVYFAY---RELCEWLNTDSQLVAAISLGYPDEE---PSRRPRLQLSDVTEW------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59205 for 1294 contacts (-45.8/contact) +
2D Compatibility (PS) -19152 + (NN) -12646 + (LL) 9844
1D Compatibility (HY) -2000 + (ID) 1200
Total energy: -84359.0 ( -65.19 by residue)
QMean score : 0.407
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