Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTDVARLLALRSFTELGARQRARALLDAGSFRELLDPFAGVQSPWLERQGIVPQADDGVVVARGLLDGQPAVLAAIEGAFQGGSLGEVSGAKIAGALELAAEDNRNGVPTRALLLLETGGVRLQEANLGLAAIAEIQAAIVDLQRYQPVVAVIAGPVGCFGGMSIAAGLCSY-VLVTREARLGLNGPQVIEQEAGIAEYDSRDRPFIWSLTGGEQRFASGLADAYLADDLDEVRTSVLAYFAKGLPARPRCRRAEDYLRRLGDLDTAEQPDAAGVRRLYQGLGQGDAT |
3IB9 Chain:B ((45-216)) | --------------KLTARERIDLLLDEGSFVEL-DEFARHRSTNFGLDANRPYGD-GVVTGYGTVDGRPVAVFSQDFTVFGGALGEVYGQKIVKVMDFAL---KTGCPV--VGINDSGGARIQEGVASLGAYGEIFRRNTHASGVIPQISLVVGP--CAGGAVYSPAITDFTVMVDQTSHMFITGPDVIKTVTGEDVGFEELGGARTHNSTSGVAHHMAGDEKDAVEYVKQLLSYLPSNNLSEPPAFPEEADLAVTDEDAELDTIVPDSANQPYDMHSVIEHVLDDA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IB9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95888 for 1370 contacts (-70.0/contact) +
2D Compatibility (PS) -19039 + (NN) -8640 + (LL) 1860
1D Compatibility (HY) -8000 + (ID) 2950
Total energy: -132657.0 ( -96.83 by residue)
QMean score : 0.444
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