Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MFESLNKVINGYGLISGFAIIGVTMAVSYWLSARLTRGRLHGSAIAIFLGL-----VLSYVGGVATGGQKGLVDVPLMSGIGLLGGAMLRDFAIVATAFGVNVEELRRAGVSGVVSLFLGVGSSFVAGVAVAMAFGYTDAVSLTTIGAGAVTYIVGPVTGAALGASSEVMALSIAAGLVKAILVMVLTPFVAPYIGLNNPRTAVIF-----GGLMGTSSGVAGGLAATDPKLVPYGCLTAAFYTAIGCLLGPSLLYFSVRGLVG |
| 4XLG Chain:A ((3-300)) | EFQQIPDFYGCYLLQSISKR-QSFYIGSTPNPVRRLRQHNGSLSRTKRDGTRPWEMVAIVYGFPSRIAALQFQHAWQHGTRYISIHHKLAMITSLLKNEYFRYMDLTLHFFNQKVEEIWKNDKFNVSNYTVSLSQDALTEI-------NNDTIDDIMDVNEKNMELVQNLYSTTLAEKTKTLLLYKEKIDTGINTC----QFCNKIIKHNNISENLFAFCRDTSCTFVSHLACAYRYFMSEDTIIPQSPKCPKCYTL---LKWCDVIYYSIKLNK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XLG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165668 for 1676 contacts (-98.8/contact) +
2D Compatibility (PS) -24145 + (NN) 970 + (LL) 1540
1D Compatibility (HY) -6400 + (ID) 1750
Total energy: -195453.0 ( -116.62 by residue)
QMean score : 0.041
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