Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKSLHQYAHVFSRLSLFGLAFAAAAQAQSQSLTVISFGGATKAAQEQAYFKPFERSG-GGQVVAGEY--NGEMAKVKAMVDVGKVSWDVVEVESPELLRGCDEGLFERLDPARF----GDPAQFVPGTF--------SECGVATYVWSMVMAYDSTKLA--R---APQSWADFWNVR-EFPGK-----RGLRKG--AKYTLEVALLADGVKA-E--DLYKVLATPEGVSRAFAKLDQLKPNI--Q--WWEAGAQPPQWLAAGDVVMSAAYNGRIAAAQKE-----GVKLAIV-WP---G---SLYDPEYWAVVKGTPNKALAEKFIAFASQPQTQKVFSEQIPYGPVHKGTLALLPKTVQEALPTAPANLEGARAVDAEFWVDHGEELEQRFNAWAAR |
| 3UOR Chain:A ((27-346)) | -----------------------------KTTVRFWAMGK--EAEVVAELVADFEKQNPTIHVDVQNIPMTAAHEKLLTAFAAD-GLPDVCQLGNTWLPEFALLDTLEPMQPYVARSKIVDPA-DYFPGVWDTNLVDGTLYGVPWYVDTRLLFYRKDLLREAGYSQMPKTWAEMEQVMAAIKRKVGPDRYAILMPLNEFEQQLSFALQQDDRLLRDHDNYGNFRGA-GFRKALGFYDNMYQQGWAPKVSETQVSNVWYEFFNGYYAFYLSGPWNVREFKLRQPPGMEGNWGTAPLPGPNGLGAGIAGGSSLVIFKSSQHKDASWKLIEYLSQPQVQARFHAIIGDLPPRRSTWKLPSLANDALAHAFGDQLERVKATPKVLEWERIVQEMRLVTERVVR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UOR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68875 for 2052 contacts (-33.6/contact) +
2D Compatibility (PS) -29539 + (NN) -9987 + (LL) 3572
1D Compatibility (HY) -7600 + (ID) 2350
Total energy: -114779.0 ( -55.94 by residue)
QMean score : 0.392
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