Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMESRILSLAALTVLE---LSPPDMVEAAARAGYSHVGLRLVPATVEEHHYPLLADAGLRRRTLARLRDSGVRTLDVEILR----L-RPD-----TRVGEFAAVLEVGAEFGARYVLVAGND-------------DDERRSADNFAALCDLARPLGLDPHLEFMPW---TGIRDLRQAARVVEAAARDNAGLLLDAFHFDRSASSLEDLRAIPPARLGYAQLCDVVGPRPTSMDEILRQAREERRFPGDGGLDLLALLRALPE---NLPLSLEVPALDLLAR-------------GV--DGAERARLAIERTRALLARL
3VNI Chain:A ((2-290))---MKHGIYYAYWEQEWEADYKYYIEKVAKLGFDILEIAASPLPF----Y----SDIQINELKACAHGNGITLTVGHGPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDVHLIGGALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFENYLINTAQEGVDFVKQVDHNNVKVMLDTFHMNIEEDSIGGAIRTAGSYLGHLHTGECN-----------------RKVPGRGRIPWVEIGEALADIGYNGSVVMEPFVRMGGTVGSNIKVWRDISNGADEKMLDREAQAALDFSRYVLEC-


General information:
TITO was launched using:
RESULT:

Template: 3VNI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125899 for 2009 contacts (-62.7/contact) +
2D Compatibility (PS) -26723 + (NN) -10974 + (LL) 2072
1D Compatibility (HY) -4800 + (ID) 2100
Total energy: -168424.0 ( -83.83 by residue)
QMean score : 0.505

(partial model without unconserved sides chains):
PDB file : Tito_3VNI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VNI-query.scw
PDB file : Tito_Scwrl_3VNI.pdb: