Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MESRILSLAALTVLE---LSPPDMVEAAARAGYSHVGLRLVPATVEEHHYPLLADAGLRRRTLARLRDSGVRTLDVEILR----L-RPD-----TRVGEFAAVLEVGAEFGARYVLVAGND-------------DDERRSADNFAALCDLARPLGLDPHLEFMPW---TGIRDLRQAARVVEAAARDNAGLLLDAFHFDRSASSLEDLRAIPPARLGYAQLCDVVGPRPTSMDEILRQAREERRFPGDGGLDLLALLRALPE---NLPLSLEVPALDLLAR-------------GV--DGAERARLAIERTRALLARL |
3VNI Chain:A ((2-290)) | ---MKHGIYYAYWEQEWEADYKYYIEKVAKLGFDILEIAASPLPF----Y----SDIQINELKACAHGNGITLTVGHGPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDVHLIGGALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFENYLINTAQEGVDFVKQVDHNNVKVMLDTFHMNIEEDSIGGAIRTAGSYLGHLHTGECN-----------------RKVPGRGRIPWVEIGEALADIGYNGSVVMEPFVRMGGTVGSNIKVWRDISNGADEKMLDREAQAALDFSRYVLEC- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VNI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125899 for 2009 contacts (-62.7/contact) +
2D Compatibility (PS) -26723 + (NN) -10974 + (LL) 2072
1D Compatibility (HY) -4800 + (ID) 2100
Total energy: -168424.0 ( -83.83 by residue)
QMean score : 0.505
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