Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEATRILLGVNIDHVATLRQARGTRYPDPVKAALDAEEAGADGITVHLREDRRHIQERDVRVLKEVLQTRMNFEMGVTEEMLAFAEEIRPAHSCLVPERREELTTEGGLDVAGQEQRIRDAVRRLAAVGSEVSLFIDPDPRQIEASARVGAPAIELHTGRYADAEDPEEQARELQRVREGVALGRSLGLIVNAGHGLHYHNVEPVAAIDGINELNIGHAIVAHALFVGFRQAVAEMKALMLAAATKR
1IXN Chain:D ((3-240))
------LLLGVNIDHIATLRNARGTAYPDPVQAAFIAEQAGADGITVHLREDRRHITDRDVRILRQTLDTRMNLEMAVTEEMLAIAVETKPHFCCLVPEKRQEVTTEGGLDVAGQRDKMRDACKRLADAGIQVSLFIDADEEQIKAAAEVGAPFIEIHTGCYADAKTDAEQAQELARIAKAATFAASLGLKVNAGHGLTYHNVKAIAAIPEMHELNIGHAIIGRAVMTGLKDAVAEMKRLMLEARG--
General information:
TITO was launched using:
RESULT:
Template:
1IXN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138801 for 2130 contacts (-65.2/contact) +
2D Compatibility (PS) -26108 + (NN) -9822 + (LL) 856
1D Compatibility (HY) -24400 + (ID) 7850
Total energy: -206125.0 ( -96.77 by residue)
QMean score : 0.542
(partial model without unconserved sides chains):
PDB file :
Tito_1IXN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IXN-query.scw
PDB file :
Tito_Scwrl_1IXN.pdb
: