Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSASAKLSRMVCLLCGFFSTGISMASSLILLSASDLAGQWTLQQDEAPAICHL-----ELRDSEVAEASGYDLGGDTACLTRWLPSEPRAWRPTPAGIALLERGGLTLMLLGRQGEGDYRVQKGDGGQLVLRRATP
2L01 Chain:A ((1-77))
-----------------------------------MKMLKEKAGALAGQIWEALNGTEGLTQKQIKKATKLKADKDFFLGLGWLLREDK--------VVTSEVEGEIFVKLVLEHHHHHH----------------
General information:
TITO was launched using:
RESULT:
Template:
2L01.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15917 for 451 contacts (-35.3/contact) +
2D Compatibility (PS) -7723 + (NN) -591 + (LL) 3624
1D Compatibility (HY) -1200 + (ID) 550
Total energy: -22357.0 ( -49.57 by residue)
QMean score : 0.306
(partial model without unconserved sides chains):
PDB file :
Tito_2L01.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L01-query.scw
PDB file :
Tito_Scwrl_2L01.pdb
: