Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSSRPYLVRALYEWIVDNDCTPHILVNAEFAGVKVPPGYASDGQIVLNVSPSAVRHLHMDNEAVSFEGRFGGVAQSLYIPALAVMAIYARENGQGMVFDLEQPGPVDDEPGDDDGGPSDEPPRPSGRPSLKVVK
1ZSZ Chain:A ((8-107))
---KRPYLLRAYYDWLVDNSFTPYLVVDATYLGVNVPVEYVKDGQIVLNLSASATGNLQLTNDFIQFNARFKGVSRELYIPMGAALAIYARENGDGVMFEPEE--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1ZSZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99276 for 679 contacts (-146.2/contact) +
2D Compatibility (PS) -10758 + (NN) -2735 + (LL) -1132
1D Compatibility (HY) -12400 + (ID) 2600
Total energy: -128901.0 ( -189.84 by residue)
QMean score : 0.553
(partial model without unconserved sides chains):
PDB file :
Tito_1ZSZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZSZ-query.scw
PDB file :
Tito_Scwrl_1ZSZ.pdb
: