Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNFSGNWKIIRSENFEEMLKALGVNMMMRKIAVAAASKPAVEIKQENDTFYIKTSTTVRTTEINFKIGEEFEEQTVDGRPCKSLVKWESGNKMVCEQRLLKGEGPKTSWSRELTNDGELILTMTADDVVCTRVYVRE
3FEK Chain:A ((1-137))
-PNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKVSTTVRTTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTLELTNDGELIDTMTADDVVCTKVFVRE
General information:
TITO was launched using:
RESULT:
Template:
3FEK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29706 for 972 contacts (-30.6/contact) +
2D Compatibility (PS) -15545 + (NN) -5721 + (LL) 208
1D Compatibility (HY) -17600 + (ID) 6150
Total energy: -74514.0 ( -76.66 by residue)
QMean score : 0.518
(partial model without unconserved sides chains):
PDB file :
Tito_3FEK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FEK-query.scw
PDB file :
Tito_Scwrl_3FEK.pdb
: