Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLLLAALLTAGAAAHSISPRAVWQFRNMIKCTIPGSDPLKDYNNYGCYCGLGGWGTPVDDLDRCCQTHDHCYSQAKKLESCKFLIDNPYTNTYSYSCSGSEITCSAKNNKCEDFICNCDREAAICFSKVPYNKEYKNLDTGKFC
1L8S Chain:B ((1-124))
----------------------ALWQFRSMIKCAIPGSHPLMDFNNYGCYCGLGGSGTPVDELDRCCETHDNCYRDAKNLDSCKFLVDNPYTESYSYSCSNTEITCNSKNNACEAFICNCDRNAAICFSKAPYNKEHKNLDTKKYC
General information:
TITO was launched using:
RESULT:
Template:
1L8S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64283 for 919 contacts (-69.9/contact) +
2D Compatibility (PS) -13047 + (NN) -6836 + (LL) 2224
1D Compatibility (HY) -16000 + (ID) 4800
Total energy: -102742.0 ( -111.80 by residue)
QMean score : 0.391
(partial model without unconserved sides chains):
PDB file :
Tito_1L8S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L8S-query.scw
PDB file :
Tito_Scwrl_1L8S.pdb
: