Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGEEGGEAPQEPQS
3P1P Chain:A ((6-236))
MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSNEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTHPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWT-----------------
General information:
TITO was launched using:
RESULT:
Template:
3P1P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78408 for 1865 contacts (-42.0/contact) +
2D Compatibility (PS) -25082 + (NN) -12428 + (LL) 108
1D Compatibility (HY) -28400 + (ID) 11450
Total energy: -155660.0 ( -83.46 by residue)
QMean score : 0.510
(partial model without unconserved sides chains):
PDB file :
Tito_3P1P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P1P-query.scw
PDB file :
Tito_Scwrl_3P1P.pdb
: