Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMYSKLLTLTTLLLPTALALPSLVERACDYTCGSNCYSSSDVSTAQAAGYQLHEDGETVGSNSYPHKYNNYEGFDFSVSSPYYEWPILSSGDVYSGGSPGADRVVFNENNQLAGVITHTGASGNNFVECT
3URP Chain:A ((2-104))
---------------------------CDYTCGSNCYSSSDVSTAQAAGYKLHEDGETVGSNSYPHKYNNYEGFDFSVSSPYYEWPILSSGDVYSGGSPGADRVVFNENNQLAGVITHTGASGNNFVECT
General information:
TITO was launched using:
RESULT:
Template:
3URP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45241 for 769 contacts (-58.8/contact) +
2D Compatibility (PS) -11813 + (NN) -10308 + (LL) 2856
1D Compatibility (HY) -12400 + (ID) 5100
Total energy: -82006.0 ( -106.64 by residue)
QMean score : 0.476
(partial model without unconserved sides chains):
PDB file :
Tito_3URP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3URP-query.scw
PDB file :
Tito_Scwrl_3URP.pdb
: