Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATPPKRSCPSFSASSEGTRIKKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQSTQDEFEELTMSQKNGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNEDFKDKYESLVEKVKEFLSTL
2NO0 Chain:B ((40-280))
-------------------RIKKISIEGNIAAGKSTFVNILKQLSEDWEVVPEPVARWSNVQST------------NGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKL-DAEKPVLFFERSVYSDRYIFASNLYESESMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNEDF---YESLVEKVKEFLSTL
General information:
TITO was launched using:
RESULT:
Template:
2NO0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119969 for 1753 contacts (-68.4/contact) +
2D Compatibility (PS) -23850 + (NN) -7575 + (LL) 1520
1D Compatibility (HY) -33200 + (ID) 11000
Total energy: -194074.0 ( -110.71 by residue)
QMean score : 0.640
(partial model without unconserved sides chains):
PDB file :
Tito_2NO0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2NO0-query.scw
PDB file :
Tito_Scwrl_2NO0.pdb
: