Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATPPKRFCPSPSTSSEGTRIKKISIEGNIAAGKSTFVNILKQASEDWEVVPEPVARWCNVQSTQEEFEELTTSQKSGGNVLQMMYEKPERWSFTFQSYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESDCMNETEWTIYQDWHDWMNSQFGQSLELDGIIYLRATPEKCLNRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTSFDYLQEVPVLTLDVNEDFKDKHESLVEKVKEFLSTL
2ZI5 Chain:B ((39-279))
-------------------RIKKISIEGNIAAGKSTFVNILKQLSEDWEVVPEPVARWSN------------MSQKNGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKL---EKPVLFFERSVYSDRYIFASNLYESESMNETEWTIYQDWHDWMNN---QSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNEDFKDKYESLVEKVKEFLSTL
General information:
TITO was launched using:
RESULT:
Template:
2ZI5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109756 for 1733 contacts (-63.3/contact) +
2D Compatibility (PS) -23391 + (NN) -5789 + (LL) 1564
1D Compatibility (HY) -32000 + (ID) 10450
Total energy: -179822.0 ( -103.76 by residue)
QMean score : 0.601
(partial model without unconserved sides chains):
PDB file :
Tito_2ZI5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZI5-query.scw
PDB file :
Tito_Scwrl_2ZI5.pdb
: