Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MATPRGLGALLLLLLLPTSGQEKPTEGPRNTCLGSNNMYDIFNLNDKALCFTKCRQSGSDSCNVENLQRYWLNYEAHLMKEGLTQKVNTPFLKALVQNLSTNTAEDFYFSLEPSQVPRQVMKDEDKPPDRVRLPKSLFRSLPGNRSVVRLAVTILDIGPGTLFKGPRLGLGDGSGVLNNRLVGLSVGQMHVTKLAEPLEIVFSHQRPPPNMTLTCVFWDVTKGTTGDWSSEGCSTEVRPEGTVCCCDHLTFFALLLRPTLDQSTVHILTRISQAGCGVSMIFLAFTIILYAFLRLSRERFKSEDAPKIHVALGGSLFLLNLAFLVNVGSGSKGSDAACWARGAVFHYFLLCAFTWMGLEAFHLYLLAVRVFNTYFGHYFLKLSLVGWGLPALMVIGTGSANSYGLYTIRDRENRTSLELCWFREGTTMYALYITVHGYFLITFLFGMVVLALVVWKIFTLSRATAVKERGKNRKKVLTLLGLSSLVGVTWGLAIFTPLGLSTVYIFALFNSLQGVFICCWFTILYLPSQSTTVSSSTARLDQAHSASQE |
4N0N Chain:A ((22-422)) | ------------SAVCTVCGAAPVAKSACGGWFCGNCVPYHAGH-----CHTTSLFAN---CGHDIMYRSTYCTMCEGSPKQMVPKVPHPILDHLLCHIDYGSKEELTLVVADGRTTS--------PPGRYKVGHKVVAVVADVGG-----NIVFGCGPGSHIAVP----------LQDTLKGVVVNKAL--KNAAASEYVEG----PPGSGKTFHLVKDVLAVVGS-------------------------ATLVVPT-HASMLDCINKLKQAGADPYFVVPKYTVL----------DFPRPGSGNITVRLPQVGTSEGETFVDEVAYFSPVDLARILTQGRVKGYGDLNQLGCVGPASVPRNLW-LRHFVSLEPLRVCH----RFGAAVCDLIK-------GIYPYYEPAPHTTKVVFVPNPD-----------------FEKGVVITAY-------------HKDRGLGHRTIDSIQGCT---FPVVTLRLPTPQSLTRPRAVVA--------VTRASQELYIYDP----------FDQLSGLLKF |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4N0N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -267983 for 3296 contacts (-81.3/contact) +
2D Compatibility (PS) -42208 + (NN) -534 + (LL) 10412
1D Compatibility (HY) -12400 + (ID) 3850
Total energy: -316563.0 ( -96.04 by residue)
QMean score : 0.209
|
|
|