Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTALSSENCSFQYQLRQTNQPLDV--NYLLFLIILGKILLNILTLGMRRKNTCQNFMEYFCISLAFVDLLLLVNISIILYFRDFV--LLSIRFTKYHICLFTQII-SFTYGFLHYP---VFLTACIDYCLNFSKTTKLS--FKCQKLFYFFTVILIWISVLAYVLGDPAIYQSLKAQNAYSRHCPFYVSIQSYWLSFFMVMILFVAFITCWEEVTTLVQAIRITSYMNETILYFPFSSHSSYTVRSKKIFLSKLIVCFLSTWLPFVLLQVIIVLLKVQIPAYIEMNIPWLYFV-------NSFLIATVYWFNCHKLNLKDIGLPLDPFVNWKCCFIPLTIPNLEQIEKPISIMIC |
| 4BZF Chain:A ((1-322)) | --------ANFIEKITYLGTPAIKAGNEHLEMIVVPEWGSNVISLVDKTTNVQ--LLREPETAESFHDTPTLYGIPILFPPNRISDGTFSFRGRTYHFDINEKDKHNHLHGFLYHEKWNVVTTKQTDEGVIVETEIDLSELPHVQKQFPHHAVVRMTYTIK-----ENTLFKHATVMNKGKEAFPWGIGYHTTFIFPAESSLFSLTADQQWELDERLLPTGKLMDVPYKEALHEGMDLRHK---QLDDVFLSSYQKRGGEN-------QAVIYHQHAHISIIYKADEQFKHWVVYNADGKQGYLCPEPYTWVTNAVNL---DLP-----SSLTGLQVLEPGEETTAKSSITIELN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BZF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -390602 for 2491 contacts (-156.8/contact) +
2D Compatibility (PS) -31663 + (NN) 15775 + (LL) 2700
1D Compatibility (HY) 2000 + (ID) 2550
Total energy: -404340.0 ( -162.32 by residue)
QMean score : 0.070
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