Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGIPGLEGLHTWISIPFSFMYIVAVAGNIFLIFLIMTERSLHEPMYLFLSMLASADFLLATAAAPKVLAILWFHSMDISFGSCVSQMFFIHFIFVAESAILLAMAFDRYVAICYPLRYTILTSSAVRKIGIAAVVRSFFICCPFIFLVYRLTYCGRNIIPHSYCEHIARLACGN-INVNIIYGLTVALLSTGLDIVLIIISYTMILHSVFQISS-----------WAARFKALSTCGSHICVIFMFYTPAFFSFLAHRFGGKTI-PH--HIHILVGSLYVLVPPMLNPIIYGVKTKQIKDRVILLFSPISVC |
| 2KS9 Chain:A ((35-324)) | ------------WAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPRL-SATATKVVICVIWVLALLLAFPQGYYSTT-ET----MPSRVVCMIE--WPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KS9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -296522 for 2156 contacts (-137.5/contact) +
2D Compatibility (PS) -28292 + (NN) -8340 + (LL) 964
1D Compatibility (HY) -22800 + (ID) 2450
Total energy: -357440.0 ( -165.79 by residue)
QMean score : 0.189
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