Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMASERNQSSTPTFILLGFSEYPEIQVPLFLVFLFVYTVTVVGNLGMIIIIRLNSKLHTIMCFFLSHLSLTDFCFSTVVTPKLLENLVVEYRTISFSGCIMQFCFACIFGVTETFMLAAMAYDRFVAVCKPLLYTTIMSQKLCALLVAGSYTWGIVCSLILTYFLLDLSFCESTFINNFICDHSVIVSASYSDPYISQRLCFIIAIFNEVSSLIIILTSYMLIFTTIMKMRSA--------SGRQKTFSTCASHLTAITIFHGTILFLYCVP--NPKT-SSLIVTVASVFYTVAIPMLNPLIYSLRNKDINNMFEKLVVTKLIYH |
| 1U19 Chain:A ((42-326)) | ---------------------------MLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLVGWSR--Y-I-PEGMQCSCGIDYYTPHE--ETNNESFVIYMF-VVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1U19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -262716 for 2191 contacts (-119.9/contact) +
2D Compatibility (PS) -26781 + (NN) 8013 + (LL) 2568
1D Compatibility (HY) -6800 + (ID) 850
Total energy: -286566.0 ( -130.79 by residue)
QMean score : 0.145
|
|
|