Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLGRCFPPDTKEKQQLRMTKLCDP-AESELSPFLITLILAVLLAEYLIGIIANGFIMAIHAAEWVQNKAVSTSGRILVFLSV------SRIALQSLMMLEITISSTSLSFYSEDAVYYAFKISFIFLNFCSLWFAAWLSFFYF-----VKIANFSYPLFLKLRWRITGLIPWLLWLSVFISFSHSMFCINICTVYCNNSFPIHSSNSTKKTYLSEINVVGLAFFFNLGIVTPLIMFILTATLLILSLKRHTLHMGSNATGS-NDPSMEAHMGAIKAISYFLILYIFNAVALFIYLSNMFDINSLWNNLCQIIMAAYPASHSILLIQDNPG-LRRAWK----RLQLRLHLYPKEWTL |
2GOP Chain:A ((10-347)) | -------------TFAKFAYLSDPRTKGELVAYVLTKANLKDNKYENTIVIENLKNNARRFIENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKNIRSLEWNEDSRKLLIVGFKRREVPAWEKTTFWIFDTESEEVIEEFEKPRFSSGIWHRD---------KIVVNVPHRE----IIPQY-FKFWDIYIWEDGKEEKMFE----KVSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYDGKEVMGILDEVDRGVGQAKIKDGKVYFTLFEEGSVNLYIWDG---EIKPIAKGRHWIM--GFDVDEIVVYLKETATRLRELFTWDGEEKQLTDYNDPIFAKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GOP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -241055 for 2292 contacts (-105.2/contact) +
2D Compatibility (PS) -30735 + (NN) 15752 + (LL) 2824
1D Compatibility (HY) -1200 + (ID) 2450
Total energy: -256864.0 ( -112.07 by residue)
QMean score : 0.051
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