Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----------------------------------------------------------------------------AVTCGDVTSAVAPCMSYASGKASAP-SGACCSGVRTLNAKAST-PADRKAACNCLKNLAGSGISMGNAASIPGKC-----GVSVSIPISTKTNCNNLH |
1ALL Chain:A ((1-160)) | SIVTKSIVNADAEARYLSPGELDRIKSFVTSGERRVRIAETMTGARERIIKQAGDQLFGKRPDVVSPGGNAYGADMTATCLRDLDYYLRLITYGIVAGDVTPIEEIGVVGVREMYKSLGTPIEAIAEGVRAMKSVATSLLSGADAAEAGSYFDYLIGAMS--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ALL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14424 for 453 contacts (-31.8/contact) +
2D Compatibility (PS) -7520 + (NN) 2011 + (LL) 608
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -22425.0 ( -49.50 by residue)
QMean score : 0.355
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