Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVTCGDVTSAVAPCMSYAT----GQTSAP-----SAGCCSGVRTLNAKASTSADRQAACRCLKKLAGS-----GI-------S----------MGNAANI--PGKCGVSVSFPINTKVDCNTLH
1BEA Chain:A ((15-109))
--------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI-------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40888 for 365 contacts (-112.0/contact) +
2D Compatibility (PS) -6309 + (NN) -2056 + (LL) 1448
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -51655.0 ( -141.52 by residue)
QMean score : 0.446
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: