Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------------------------------------------------------AVTCSDVTSAIAPCMSYATGQASSPSAGC---CSGVRTLNGKAS-----------TSADRQAACRCLKNLAGSF-----NGISMGNAANIPGKCGVSVSFPINNNVNCDNLH-------- |
1QPO Chain:A ((116-284)) | IATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAA-AGSVVDALRAVRNA------APDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVD---YLAVGALTHSVRVLDIGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19736 for 414 contacts (-47.7/contact) +
2D Compatibility (PS) -8867 + (NN) -3976 + (LL) 468
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -34861.0 ( -84.21 by residue)
QMean score : 0.414
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