Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ISCSTVYSTLMPCLQYVQQ-----GGS--------PARGCCTGIQNLLVEANNSPDRRTICGCLENVANGASGGP----YITRAAALPSKCNVALPYKISPSVDCNSIH
1S6D Chain:A ((19-97))
-------EMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLD--------EKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM---------------
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52776 for 399 contacts (-132.3/contact) +
2D Compatibility (PS) -6510 + (NN) -2751 + (LL) 1088
1D Compatibility (HY) -5200 + (ID) 700
Total energy: -66849.0 ( -167.54 by residue)
QMean score : 0.288
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: