Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------------------------------------------------------------------------------------QDCDAGKLI-VCAAAIIGGAEPSASCCTNLKAQRGCLCKYASN-PAYSGYINSPTTRKTLASCGIPIPTCPQ
1ELK Chain:A ((1-153))
SDFLLGNPFSSPVGQRIEKATDGSLQSEDWALNMEICDIINETEEGPKDALRAVKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVESVLVRTILPKNNPPTIVHDKVLNLIQSWADAFRSSPDLTGV---VTIYEDLRRKGLEFPM---
General information:
TITO was launched using:
RESULT:
Template:
1ELK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21823 for 387 contacts (-56.4/contact) +
2D Compatibility (PS) -6567 + (NN) -337 + (LL) 132
1D Compatibility (HY) -2400 + (ID) 450
Total energy: -31445.0 ( -81.25 by residue)
QMean score : 0.325
(partial model without unconserved sides chains):
PDB file :
Tito_1ELK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ELK-query.scw
PDB file :
Tito_Scwrl_1ELK.pdb
: