Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------------------------------QAPPPPQCDPGLLSPCAAPIFFGTAPSASCCSSLKAQQGCFCQYAKDPTYASYINSTNARKMIAACGIPLPNCG-------------------------------------------------------------------
1WLJ Chain:A ((6-178))
EVVAMDCEMVGLGPHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVGATP-------FAVARLEILQLLKG----KLVVGHDLKHDFQALKEDMSGYTIYDTSTDRLLWREAKLVSLRVLSERLLHKSIQNSLLGHSSVEDARATMELYQISQRIRARRGLPRLA
General information:
TITO was launched using:
RESULT:
Template:
1WLJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18767 for 308 contacts (-60.9/contact) +
2D Compatibility (PS) -7080 + (NN) -11271 + (LL) 292
1D Compatibility (HY) -3200 + (ID) 300
Total energy: -40326.0 ( -130.93 by residue)
QMean score : 0.277
(partial model without unconserved sides chains):
PDB file :
Tito_1WLJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WLJ-query.scw
PDB file :
Tito_Scwrl_1WLJ.pdb
: